Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015789106.1_cds_XP_016494589.1_845
CDS Infomation

[gene=LOC107813795] [db_xref=GeneID:107813795] [protein=probable polyamine oxidase 5] [protein_id=XP_016494589.1] [location=85976..87586] [gbkey=CDS]
Sequence

ATGGGAAGCAAGAAGCCAAAAGTAGTGATAATTGGGGCAGGAATGGCTGGCCTTACAGCA
GCTAATAAGCTCTATAAAACAGCAGGATCCAAGGAATTATTAGAGGTGTGTGTAGTTGAG
GGTGGTAATAGGATTGGTGGAAGAATTAACACATCAGAATTCTGTGGTGACAGGATTGAA
ATGGGTGCTACTTGGATTCATGGAATTATAGGCAGTCCTGTTTATAAGATTGCTCAACAA
ATTAACTCACTGCAATCTCAGCAACCTTGGGAGTGTATGGATGGAGATATTGAACCGTTG
ACCATTGCTGAAGGTAGACATGAACTCAATTCTTCCCTTGTTGAGTCCATCTCTGACCTT
TTCAACAAACTCATGGATTTTGCTCAAGGGAAATTAGTCACTGAAGATGGCGTATCCAAT
GAAATTGCTAAATCCAACAATGGATTAAGTCTTGGTTCTTTCCTTAGGAAAGGACTTGAT
GCTTATTGGGAATCAGTGAAAGGCGATCGCGAGGATATTGAGGTACAAGGGATTGATAAA
TGGAGCAAAAGATCACTTGAAGAAGGGATTTTTGCAATGTTTGAGAATATTCAAAGGACT
TATACATCAGCTGGTGATTTGCAAATGCTTGATTTCAGTGCTGAAAAAGAGTATCGAATG
TTCCCTGGAGAAGAAATTACCATTGCTAAAGGCTACTTGTCCGTGATTGAATCTTTGGCA
TCTGTTCTGCCACCTGGTTTGATCCAATTAGGCCGAAAAGTCGCAAAGATTGAGTGGCAG
CCTGAGGGTTCATTACAATTTGAAAATGGTACTAATAATAAGGCAGTGAAGTTACATTTT
GTGGATGGTTCAATTATGTATGCTGATCATGTCATAGTTACAGTTTCACTTGGAGTTCTA
AAACAAGGGATTAATCAAGATTCTGGTATGTTTAATCCTCCACTTCCTCATTTCAAGACT
CAAGCAATCTCAAGGCTTGGTTTTGGTGTTGTAAACAAGCTATTCTTGAAACTAAATCCA
ACCCATAATCAAGAATATGGCATAAAATTTCCTTATCTGCAGATGGTTTTCCATCAAACA
AAACCAAACCCAAAAATTCCTTGGTGGATGAGGAGAACAGCTAATTTATGTCCAATCTAT
AGCAAGTCAAGTGTTTTATTATCTTGGTTTGCAGGTAAAGAAGCTCTTGAGTTGGAATCT
CTTGATAATGAAGAGATCATTGATGGTTTTTCAAAAACTATCTCTAGCTTTCTTTTAAAC
TCAAAACATTTCAAGAAATCAAATGACTTGTGCTGCAATGGGCATGCAGAAAGTAACTTT
AAAGTGGAAAAGGTGTTAAAGAGCCAATGGGGAAGTGATCCATTATTCTTGGGTTCATAT
AGTTATGTAGCAGTTGGATCAAGTGGAGATGATTTGGATATTATGGCTGAGCCCTTGCCA
AAAAGGACTAGCATTCATAATTCAAATGGTTGCTCTTCTCCTCCACTTCAAATTCTGTTT
GCAGGAGAAGCAACACATAGAACTCACTATTCAACAACTCATGGTGCTTATTTTAGTGGC
CTAAGAGAAGCCAATAGGCTTCTTAATCACTATCATTTTATGGATATATGA

Peptide Sequence

PEP ID

XP_016494589.1
PEP Infomation

PREDICTED: probable polyamine oxidase 5 [Nicotiana tabacum]
Sequence

MGSKKPKVVIIGAGMAGLTAANKLYKTAGSKELLEVCVVEGGNRIGGRINTSEFCGDRIE
MGATWIHGIIGSPVYKIAQQINSLQSQQPWECMDGDIEPLTIAEGRHELNSSLVESISDL
FNKLMDFAQGKLVTEDGVSNEIAKSNNGLSLGSFLRKGLDAYWESVKGDREDIEVQGIDK
WSKRSLEEGIFAMFENIQRTYTSAGDLQMLDFSAEKEYRMFPGEEITIAKGYLSVIESLA
SVLPPGLIQLGRKVAKIEWQPEGSLQFENGTNNKAVKLHFVDGSIMYADHVIVTVSLGVL
KQGINQDSGMFNPPLPHFKTQAISRLGFGVVNKLFLKLNPTHNQEYGIKFPYLQMVFHQT
KPNPKIPWWMRRTANLCPIYSKSSVLLSWFAGKEALELESLDNEEIIDGFSKTISSFLLN
SKHFKKSNDLCCNGHAESNFKVEKVLKSQWGSDPLFLGSYSYVAVGSSGDDLDIMAEPLP
KRTSIHNSNGCSSPPLQILFAGEATHRTHYSTTHGAYFSGLREANRLLNHYHFMDI

Transcript Sequence

Gene sequence data has not been registered.